STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA60704.1Hypothetical protein. (325 aa)    
Predicted Functional Partners:
SEA60678.1
single-stranded-DNA-specific exonuclease.
       0.837
SEA46525.1
Hypothetical protein.
  
     0.763
SEA66489.1
Sporulation related domain-containing protein.
  
     0.711
SEA24573.1
Barstar (barnase inhibitor).
  
     0.634
SDZ72905.1
4-amino-4-deoxy-L-arabinose transferase.
  
     0.621
ftsL
Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.
  
     0.620
SEA25739.1
Protein of unknown function.
  
     0.607
SEA16801.1
General secretion pathway protein K.
  
     0.595
SEA85752.1
Antitoxin CptB.
  
     0.573
SDZ84635.1
Protein of unknown function.
  
     0.545
Your Current Organism:
Acidovorax soli
NCBI taxonomy Id: 592050
Other names: A. soli, Acidovorax soli Choi et al. 2010, Acidovorax sp. BL21, DSM 25157, JCM 15909, KCTC 22399, strain BL21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.