STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA64452.1uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase/uroporphyrin-III C-methyltransferase/5,6-dimethylbenzimidazole synthase; Belongs to the precorrin methyltransferase family. (248 aa)    
Predicted Functional Partners:
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
 
 0.997
SEA64642.1
Sirohydrochlorin cobaltochelatase.
 
 
 0.995
SEA11193.1
uroporphyrin-III C-methyltransferase.
 
 
0.975
SEA64496.1
precorrin-3B C17-methyltransferase.
 
 
0.968
SEA80449.1
Porphobilinogen synthase; Belongs to the ALAD family.
 
 
 0.963
SEA64557.1
Precorrin-2/cobalt-factor-2 C20-methyltransferase; Methylates precorrin-2 at the C-20 position to produce precorrin-3A.
    
 0.958
SEA64579.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
  
 
 0.954
SEA47726.1
Sirohydrochlorin cobaltochelatase.
  
 
 0.953
SEA64665.1
Precorrin-4/cobalt-precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 
0.952
SDZ76931.1
Sulfite reductase (NADPH) hemoprotein beta-component.
 
  
 0.935
Your Current Organism:
Acidovorax soli
NCBI taxonomy Id: 592050
Other names: A. soli, Acidovorax soli Choi et al. 2010, Acidovorax sp. BL21, DSM 25157, JCM 15909, KCTC 22399, strain BL21
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