STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA70208.1Predicted transcriptional regulator, contains HTH domain. (671 aa)    
Predicted Functional Partners:
SEA70232.1
Type I restriction enzyme, S subunit.
 
    0.782
SEA70181.1
Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
    0.768
SEA70261.1
Type I restriction enzyme M protein.
 
    0.673
SEA24894.1
ATP-dependent DNA helicase RecG.
  
  
  0.655
SEA52047.1
Predicted ATP-dependent endonuclease of the OLD family, contains P-loop ATPase and TOPRIM domains.
  
    0.576
SEA70159.1
mRNA interferase HigB.
 
     0.451
SEA03703.1
Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.436
SEA64432.1
Type I restriction enzyme, R subunit.
  
    0.436
SEA89846.1
Type I restriction enzyme, R subunit.
  
    0.436
SDZ81140.1
Nitrous oxide reductase accessory protein NosL.
  
     0.420
Your Current Organism:
Acidovorax soli
NCBI taxonomy Id: 592050
Other names: A. soli, Acidovorax soli Choi et al. 2010, Acidovorax sp. BL21, DSM 25157, JCM 15909, KCTC 22399, strain BL21
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