Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ93803.1 | SEA73730.1 | SAMN05421875_103187 | SAMN05421875_12622 | [acyl-carrier-protein] S-malonyltransferase. | 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. | 0.750 |
SEA00365.1 | SEA49212.1 | SAMN05421875_10441 | SAMN05421875_11519 | Benzoate/toluate 1,2-dioxygenase reductase subunit. | CDP-4-dehydro-6-deoxyglucose reductase. | 0.691 |
SEA00365.1 | SEA73730.1 | SAMN05421875_10441 | SAMN05421875_12622 | Benzoate/toluate 1,2-dioxygenase reductase subunit. | 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. | 0.838 |
SEA00365.1 | SEA75364.1 | SAMN05421875_10441 | SAMN05421875_12743 | Benzoate/toluate 1,2-dioxygenase reductase subunit. | Glutamate synthase (NADH) large subunit. | 0.822 |
SEA03871.1 | SEA73646.1 | SAMN05421875_104171 | SAMN05421875_12618 | Acyl dehydratase. | cyclohexanecarboxyl-CoA dehydrogenase. | 0.407 |
SEA03871.1 | SEA73730.1 | SAMN05421875_104171 | SAMN05421875_12622 | Acyl dehydratase. | 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. | 0.940 |
SEA49212.1 | SEA00365.1 | SAMN05421875_11519 | SAMN05421875_10441 | CDP-4-dehydro-6-deoxyglucose reductase. | Benzoate/toluate 1,2-dioxygenase reductase subunit. | 0.691 |
SEA49212.1 | SEA73730.1 | SAMN05421875_11519 | SAMN05421875_12622 | CDP-4-dehydro-6-deoxyglucose reductase. | 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. | 0.689 |
SEA49212.1 | SEA75364.1 | SAMN05421875_11519 | SAMN05421875_12743 | CDP-4-dehydro-6-deoxyglucose reductase. | Glutamate synthase (NADH) large subunit. | 0.822 |
SEA73598.1 | SEA73624.1 | SAMN05421875_12616 | SAMN05421875_12617 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | cyclohexanecarboxylate-CoA ligase. | 0.765 |
SEA73598.1 | SEA73646.1 | SAMN05421875_12616 | SAMN05421875_12618 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | cyclohexanecarboxyl-CoA dehydrogenase. | 0.850 |
SEA73598.1 | SEA73730.1 | SAMN05421875_12616 | SAMN05421875_12622 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. | 0.728 |
SEA73598.1 | menB | SAMN05421875_12616 | SAMN05421875_12621 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.496 |
SEA73624.1 | SEA73598.1 | SAMN05421875_12617 | SAMN05421875_12616 | cyclohexanecarboxylate-CoA ligase. | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.765 |
SEA73624.1 | SEA73646.1 | SAMN05421875_12617 | SAMN05421875_12618 | cyclohexanecarboxylate-CoA ligase. | cyclohexanecarboxyl-CoA dehydrogenase. | 0.943 |
SEA73624.1 | SEA73730.1 | SAMN05421875_12617 | SAMN05421875_12622 | cyclohexanecarboxylate-CoA ligase. | 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. | 0.750 |
SEA73624.1 | SEA73752.1 | SAMN05421875_12617 | SAMN05421875_12623 | cyclohexanecarboxylate-CoA ligase. | DNA-binding transcriptional regulator, MarR family. | 0.795 |
SEA73624.1 | menB | SAMN05421875_12617 | SAMN05421875_12621 | cyclohexanecarboxylate-CoA ligase. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.743 |
SEA73646.1 | SEA03871.1 | SAMN05421875_12618 | SAMN05421875_104171 | cyclohexanecarboxyl-CoA dehydrogenase. | Acyl dehydratase. | 0.407 |
SEA73646.1 | SEA73598.1 | SAMN05421875_12618 | SAMN05421875_12616 | cyclohexanecarboxyl-CoA dehydrogenase. | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.850 |
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