STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA79234.1Hypothetical protein. (276 aa)    
Predicted Functional Partners:
SEA03871.1
Acyl dehydratase.
 
  0.910
SEA00365.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
 
 0.907
SEA83145.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    
0.860
SEA79258.1
2-pyrone-4,6-dicarboxylate lactonase.
 
 
  0.801
SEA75364.1
Glutamate synthase (NADH) large subunit.
     
 0.772
SEA03897.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
    
0.765
SEA79189.1
Alkylhydroperoxidase AhpD family core domain-containing protein.
 
     0.733
SEA49212.1
CDP-4-dehydro-6-deoxyglucose reductase.
 
 0.698
SEA62881.1
Phenol hydroxylase P5 protein.
 
 0.687
SEA72838.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 0.674
Your Current Organism:
Acidovorax soli
NCBI taxonomy Id: 592050
Other names: A. soli, Acidovorax soli Choi et al. 2010, Acidovorax sp. BL21, DSM 25157, JCM 15909, KCTC 22399, strain BL21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.