STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA82336.1Sulfur-oxidizing protein SoxY. (263 aa)    
Predicted Functional Partners:
SEA82316.1
Quinoprotein relay system zinc metallohydrolase 1.
 
     0.952
SEA82300.1
Alcohol dehydrogenase (cytochrome c).
 
  
  0.901
SEA82350.1
ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system.
 
     0.900
SEA24984.1
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
   
 0.848
SEA77736.1
5'-nucleotidase.
   
 0.848
SEA82367.1
PQQ-dependent catabolism-associated beta-propeller protein.
 
     0.847
SEA82248.1
Cytochrome c-550 PedF.
 
  
 0.835
SEA60291.1
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family.
   
 0.833
SDZ76877.1
Sulfate adenylyltransferase subunit 2.
     
 0.815
SEA44944.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
     
 0.809
Your Current Organism:
Acidovorax soli
NCBI taxonomy Id: 592050
Other names: A. soli, Acidovorax soli Choi et al. 2010, Acidovorax sp. BL21, DSM 25157, JCM 15909, KCTC 22399, strain BL21
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.