STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA85528.1Nitronate monooxygenase. (317 aa)    
Predicted Functional Partners:
SEA08324.1
MFS transporter, NNP family, nitrate/nitrite transporter.
  
 
 0.953
SEA08354.1
MFS transporter, NNP family, nitrate/nitrite transporter.
  
 
 0.953
SEA08472.1
Nitrate reductase gamma subunit.
    
  0.951
SEA62559.1
Nitronate monooxygenase.
  
  
  0.902
SEA85511.1
Hypothetical protein.
  
 
  0.700
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.687
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.632
SEA00901.1
Acyl carrier protein.
  
 0.632
SEA35507.1
Phosphopantetheine attachment site.
  
 0.632
SEA17371.1
Hypothetical protein.
  
 
  0.616
Your Current Organism:
Acidovorax soli
NCBI taxonomy Id: 592050
Other names: A. soli, Acidovorax soli Choi et al. 2010, Acidovorax sp. BL21, DSM 25157, JCM 15909, KCTC 22399, strain BL21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.