STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA88464.1Fumarylacetoacetate (FAA) hydrolase family protein. (387 aa)    
Predicted Functional Partners:
SEA88476.1
Altronate hydrolase.
 
   
 0.819
SEA88449.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
 
 
 0.742
SEA03292.1
NADP-dependent aldehyde dehydrogenase.
 
 0.712
SEA44036.1
NADP-dependent aldehyde dehydrogenase.
 
 0.663
SEA88572.1
2-keto-3-deoxy-L-fuconate dehydrogenase.
     0.585
SEA81382.1
Sugar lactone lactonase YvrE.
 
   
 0.493
SEA88492.1
Polar amino acid transport system substrate-binding protein.
       0.490
SEA53022.1
Altronate hydrolase.
 
   
 0.479
SEA43992.1
5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
 
  
  0.442
SDZ99949.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
 
  
  0.434
Your Current Organism:
Acidovorax soli
NCBI taxonomy Id: 592050
Other names: A. soli, Acidovorax soli Choi et al. 2010, Acidovorax sp. BL21, DSM 25157, JCM 15909, KCTC 22399, strain BL21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.