STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA88476.1Altronate hydrolase. (508 aa)    
Predicted Functional Partners:
SEA88464.1
Fumarylacetoacetate (FAA) hydrolase family protein.
 
   
 0.819
SEA88572.1
2-keto-3-deoxy-L-fuconate dehydrogenase.
 
  
  0.671
SEA52901.1
4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  0.618
SEA88492.1
Polar amino acid transport system substrate-binding protein.
       0.574
SEA88449.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
       0.541
SEA88507.1
Polar amino acid transport system ATP-binding protein.
       0.484
SEA88525.1
Polar amino acid transport system permease protein.
       0.484
SEA88539.1
Polar amino acid transport system permease protein.
       0.472
SDZ99976.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
  
 0.458
Your Current Organism:
Acidovorax soli
NCBI taxonomy Id: 592050
Other names: A. soli, Acidovorax soli Choi et al. 2010, Acidovorax sp. BL21, DSM 25157, JCM 15909, KCTC 22399, strain BL21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.