Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADU68558.1Transcriptional regulator, GntR family; TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: eta:ETA_22230 GntR-family transcriptional regulatory protein; SMART: regulatory protein GntR HTH. (251 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.908
hutI
TIGRFAM: imidazolonepropionase; KEGG: eta:ETA_22200 imidazolonepropionase; PFAM: amidohydrolase.
 
  
 0.876
hutH
TIGRFAM: histidine ammonia-lyase; KEGG: eta:ETA_22240 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase.
 
  
 0.854
ADU68559.1
PFAM: protein of unknown function DUF886; KEGG: eta:ETA_22220 conserved hypothetical protein YdjR.
 
  
 0.810
ADU67910.1
Transcriptional regulator, XRE family; TIGRFAM: nicotinamide-nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: helix-turn-helix domain protein; KEGG: sfv:SFV_4424 nicotinamide-nucleotide adenylyltransferase; SMART: helix-turn-helix domain protein.
   
  
 0.794
ADU68567.1
KEGG: kpe:KPK_3142 putative histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase.
 
  
 0.666
ADU68560.1
KEGG: eta:ETA_22210 N-formimino-L-glutamate deiminase; TIGRFAM: formiminoglutamate deiminase; PFAM: amidohydrolase.
 
  
 0.647
ADU69770.1
Transcriptional regulator, GntR family; TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; KEGG: pct:PC1_0886 phophonate C-P lyase system transcriptional regulator PhnF, GntR family; SMART: regulatory protein GntR HTH.
  
   
 0.574
ADU68562.1
KEGG: spe:Spro_2076 N-formylglutamate amidohydrolase; TIGRFAM: N-formylglutamate amidohydrolase; PFAM: N-formylglutamate amidohydrolase.
 
  
 0.548
ADU67610.1
KEGG: ddc:Dd586_3422 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
   
 0.529
Your Current Organism:
Pantoea sp. At9b
NCBI taxonomy Id: 592316
Other names: P. sp. At-9b, Pantoea sp. At-9b
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.