STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU70075.1PFAM: major facilitator superfamily MFS_1; KEGG: cko:CKO_00464 hypothetical protein. (393 aa)    
Predicted Functional Partners:
ADU67868.1
KEGG: bbr:BB1475 hypothetical protein.
  
     0.514
ADU67674.1
KEGG: eta:ETA_30600 gluconate 2-dehydrogenase flavoprotein (GADH dehydrogenase subunit); PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; glucose-methanol-choline oxidoreductase.
  
     0.505
ADU67673.1
KEGG: eta:ETA_30610 gluconate 2-dehydrogenase subunit 3.
  
     0.499
ADU68758.1
PFAM: protein of unknown function DUF1375; KEGG: ssn:SSON_1064 hypothetical protein.
  
     0.453
ADU70076.1
PFAM: Beta-ketoacyl synthase; KEGG: kpe:KPK_1426 3-oxoacyl-(acyl carrier protein) synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
    0.442
ADU67869.1
KEGG: spe:Spro_2015 gluconate 2-dehydrogenase (acceptor).
  
     0.427
ADU70557.1
PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: eta:ETA_13670 conserved hypothetical protein YqjH.
 
     0.420
Your Current Organism:
Pantoea sp. At9b
NCBI taxonomy Id: 592316
Other names: P. sp. At-9b, Pantoea sp. At-9b
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