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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU70504.1KEGG: ent:Ent638_3122 HlyD family type I secretion membrane fusion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein. (406 aa)    
Predicted Functional Partners:
ADU70505.1
TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: ent:Ent638_3121 ABC transporter related; SMART: AAA ATPase.
 
 0.981
ADU70506.1
KEGG: set:SEN2610 putative type I secretion protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein.
 
 0.974
ADU68741.1
TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; peptidase C39 bacteriocin processing; KEGG: bam:Bamb_3149 ABC transporter related; SMART: AAA ATPase.
 
 0.894
ADU68739.1
PFAM: outer membrane efflux protein; KEGG: bam:Bamb_3147 outer membrane efflux protein.
 
 
 0.855
ADU70507.1
Conserved hypothetical protein; TIGRFAM: type 1 secretion C-terminal target domain; outer membrane adhesin like proteiin; KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein.
 
  
 0.723
ADU68819.1
KEGG: ypp:YPDSF_3808 hypothetical protein; PFAM: ABC transporter related; ABC transporter transmembrane region; peptidase C39 bacteriocin processing; SMART: AAA ATPase.
 
 
 0.555
ADU70678.1
KEGG: eta:ETA_04320 outer membrane channel protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein.
  
 
 0.508
ADU68742.1
Outer membrane adhesin like proteiin; KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein; TIGRFAM: outer membrane adhesin like proteiin; PFAM: FG-GAP repeat protein.
 
  
 0.505
speB
Agmatinase; Catalyzes the formation of putrescine from agmatine. Belongs to the arginase family. Agmatinase subfamily.
       0.480
ADU68582.1
KEGG: esa:ESA_02519 hypothetical protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein.
  
 
 0.451
Your Current Organism:
Pantoea sp. At9b
NCBI taxonomy Id: 592316
Other names: P. sp. At-9b, Pantoea sp. At-9b
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