STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU70504.1KEGG: ent:Ent638_3122 HlyD family type I secretion membrane fusion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein. (406 aa)    
Predicted Functional Partners:
ADU70505.1
TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: ent:Ent638_3121 ABC transporter related; SMART: AAA ATPase.
 
 0.987
ADU70506.1
KEGG: set:SEN2610 putative type I secretion protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein.
 0.980
ADU68741.1
TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; peptidase C39 bacteriocin processing; KEGG: bam:Bamb_3149 ABC transporter related; SMART: AAA ATPase.
 
 
 0.928
ADU68739.1
PFAM: outer membrane efflux protein; KEGG: bam:Bamb_3147 outer membrane efflux protein.
 
 0.892
ADU70507.1
Conserved hypothetical protein; TIGRFAM: type 1 secretion C-terminal target domain; outer membrane adhesin like proteiin; KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein.
 
  
 0.736
ADU68819.1
KEGG: ypp:YPDSF_3808 hypothetical protein; PFAM: ABC transporter related; ABC transporter transmembrane region; peptidase C39 bacteriocin processing; SMART: AAA ATPase.
  
 
 0.698
ADU70678.1
KEGG: eta:ETA_04320 outer membrane channel protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein.
  
 0.643
ADU68582.1
KEGG: esa:ESA_02519 hypothetical protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein.
  
 0.572
ADU68748.1
KEGG: eta:ETA_20680 type I secretion outer membrane protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein.
  
 0.572
ADU69156.1
KEGG: spe:Spro_2477 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein.
  
 0.572
Your Current Organism:
Pantoea sp. At9b
NCBI taxonomy Id: 592316
Other names: P. sp. At-9b, Pantoea sp. At-9b
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.