STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU70613.1KEGG: dze:Dd1591_3126 hypothetical protein. (183 aa)    
Predicted Functional Partners:
ADU70614.1
PFAM: Domain of unknown function DUF1987; KEGG: bgl:bglu_1g10770 putative lipoprotein.
 
 
 0.994
ADU70612.1
KEGG: dda:Dd703_2934 protein serine/threonine phosphatase; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein.
 
  
 0.955
ADU70615.1
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dda:Dd703_2937 diguanylate cyclase; SMART: GGDEF domain containing protein.
       0.773
ADU70611.1
TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; KEGG: saz:Sama_0654 putative methyl-accepting chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; PAS domain containing protein; PAC repeat-containing protein.
       0.727
Your Current Organism:
Pantoea sp. At9b
NCBI taxonomy Id: 592316
Other names: P. sp. At-9b, Pantoea sp. At-9b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.