STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU70713.1PFAM: Baseplate J family protein; KEGG: eta:ETA_05840 probable phage baseplate assembly protein. (304 aa)    
Predicted Functional Partners:
ADU70712.1
KEGG: eta:ETA_05850 putative phage tail protein; TIGRFAM: phage tail protein I; PFAM: tail protein I.
 
 
 0.995
ADU70715.1
KEGG: sed:SeD_A3037 phage baseplate assembly protein V; TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V.
 
  
 0.991
ADU70711.1
Phage-related tail fibre protein-like protein; KEGG: eta:ETA_05860 putative phage tail fiber protein.
 
  
 0.989
ADU70714.1
PFAM: GPW/gp25 family protein; KEGG: sea:SeAg_B2853 baseplate assembly protein W.
 
 
 0.988
ADU70708.1
KEGG: sed:SeD_A3030 phage major tail tube protein FII; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein.
 
 
 0.987
ADU70709.1
PFAM: tail sheath protein; KEGG: sbc:SbBS512_E2493 major tail sheath protein.
 
   0.986
ADU70704.1
PFAM: P2 GpU family protein; KEGG: sek:SSPA2380 putative phage tail protein.
 
 
 0.984
ADU70722.1
PFAM: tail X family protein; KEGG: sek:SSPA2400 putative phage tail protein.
 
 
 0.979
ADU70703.1
PFAM: late control D family protein; KEGG: ecq:ECED1_3062 late control gene D protein (GpD).
 
  
 0.973
ADU69583.1
PFAM: GPW/gp25 family protein; KEGG: ctu:Ctu_32270 baseplate assembly protein W.
 
 
 0.949
Your Current Organism:
Pantoea sp. At9b
NCBI taxonomy Id: 592316
Other names: P. sp. At-9b, Pantoea sp. At-9b
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