STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCW61789.1Amino acid ABC transporter substrate-binding protein, PAAT family. (253 aa)    
Predicted Functional Partners:
SCW51612.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 
 0.918
SCW77727.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
  
  0.784
SCW45119.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
     0.783
SCW45105.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
     0.777
SCW34432.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
     0.773
SCW65516.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
     0.772
SCW59636.1
Polar amino acid transport system substrate-binding protein.
  
     0.767
SCW70367.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
     0.766
SCW71126.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
     0.765
SCW36533.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
     0.755
Your Current Organism:
Pseudomonas peli
NCBI taxonomy Id: 592361
Other names: DSM 17833, LMG 23201, LMG:23201, P. peli, Pseudomonas peli Vanparys et al. 2006, Pseudomonas sp. R-20815, strain R-20805
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