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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGAM_0002Glycosyltransferase, family 1. (381 aa)    
Predicted Functional Partners:
TGAM_0001
Putative asparagine synthase, glutamine-hydrolyzing.
  
  
 0.822
TGAM_2157
Conserved hypothetical protein containing PHP domain N-terminal region.
 
     0.812
TGAM_0003
Conserved hypothetical protein; 15 probable transmembrane helices predicted by modhmm.
       0.777
algD
GDP-mannose 6-dehydrogenase (algD).
 
  
 0.629
TGAM_1697
Hydrolase, alpha/beta superfamily; 1 probable transmembrane helix predicted by modhmm.
   
 
 0.593
TGAM_2145
Glycosyltransferase, family 1, putative.
  
     0.558
TGAM_0004
Polysaccharide biosynthesis protein; 10 probable transmembrane helices predicted by modhmm.
 
  
 0.493
TGAM_2139
Polysaccharide biosynthesis protein; 14 probable transmembrane helices predicted by modhmm.
 
  
 0.489
TGAM_1072
Putative phosphoglycolate phosphatase fused to dolichol-phosphate mannose synthase (pgp/Dpm1).
 
  
 0.482
TGAM_2149
Acetyl/acyl transferase related protein.
 
  
 0.461
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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