Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_0072Zinc-binding alcohol dehydrogenase. (357 aa)    
Predicted Functional Partners:
nadE
NH(3)-dependent NAD synthetase (nadE); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
  
    0.671
gltD-1
Glutamate synthase [NADPH] small chain (gltD).
  
  
 0.547
TGAM_0071
4Fe-4S ferredoxin, iron-sulfur binding.
  
  
 0.540
TGAM_0069
7Fe ferredoxin.
     
 0.530
TGAM_0733
Oxidoreductase, aldo/keto reductase family.
 
 
 0.467
TGAM_1072
Putative phosphoglycolate phosphatase fused to dolichol-phosphate mannose synthase (pgp/Dpm1).
  
  
 0.450
TGAM_0074
Putative nucleotide binding protein, containing TRAM domain.
       0.439
kbl
2-amino-3-oxobutanoate synthase (glycine C-acetyltransferase) (kbl).
  
  
 0.435
frhB
Coenzyme F420-reducing hydrogenase, beta subunit (frhB).
  
    0.415
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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