Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_0091Amino acid ABC transporter, periplasmic amino acid-binding protein; 1 probable transmembrane helix predicted by modhmm. (257 aa)    
Predicted Functional Partners:
TGAM_0092
Amino acid ABC transporter, permease protein; Putative His/Glu/Gln/Arg/opine transporter; 3 probable transmembrane helices predicted by modhmm.
 
 0.995
TGAM_0095
ABC-type amino acid transport system, permease component; N terminus is i n tg0094. Possibly a frameshift; 2 probable transmembrane helices predicted by modhmm.
 
 0.992
TGAM_0093
ABC-type amino acid transport system, ATPase component.
 
 
 0.971
TGAM_1855
Amino acid transporter; 12 probable transmembrane helices predicted by modhmm.
  
 
 0.669
TGAM_0090
Conserved hypothetical protein; Belongs to the UPF0147 family.
       0.509
TGAM_1562
ABC-type transport system, periplasmic component; Belongs to bacterial extracellular solute-binding protein, family 1 (PF01547); 1 probable transmembrane helix predicted by modhmm.
 
  
 0.452
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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