Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_0113Nucleic acid binding protein, containing 3 OB-fold domains; Duplication with tg0112 C-terminus; 1 probable transmembrane helix predicted by modhmm. (470 aa)    
Predicted Functional Partners:
TGAM_0114
Peptidase, prolyl oligopeptidase family.
       0.596
TGAM_0111
Conserved hypothetical protein; Belongs to DUF112 family; 11 probable transmembrane helices predicted by modhmm.
       0.544
TGAM_0110
Nucleic acid-binding protein, putative; Contains 1 OB-fold domain (IPR008994); 5 probable transmembrane helices predicted by modhmm.
       0.519
TGAM_0112
Nucleic acid binding protein, containing 3 OB-fold domains; Duplication with tg0113; 1 probable transmembrane helix predicted by modhmm.
      
0.519
TGAM_0115
Conserved hypothetical protein; 4 probable transmembrane helices predicted by modhmm.
       0.440
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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