Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
TGAM_0210Hypothetical protein; 2 probable transmembrane helices predicted by modhmm. (317 aa)    
Predicted Functional Partners:
TGAM_0211
Hypothetical protein; 2 probable transmembrane helices predicted by modhmm.
      
0.782
TGAM_0205
Predicted AP endonuclease; May be also related to Xylose isomerase.
       0.505
pstC
ABC-type phosphate transport system, permease component (pstC); Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
       0.505
pstA
ABC-type phosphate transport system, permease component (pstA); 5 probable transmembrane helices predicted by modhmm.
       0.505
pstB
ABC-type phosphate transport system, ATPase component (pstB); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
       0.505
phoU-1
Phosphate ABC transporter, regulatory protein (phoU).
       0.505
pstS
ABC-type phosphate transport system, periplasmic component (PstS); 1 probable transmembrane helix predicted by modhmm; Belongs to the PstS family.
       0.458
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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