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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
porDPyruvate synthase subunit porD (pyruvate oxidoreductase delta chain) (pyruvate ferredoxin oxidoreductase) (porD). (105 aa)    
Predicted Functional Partners:
porB
Pyruvate synthase subunit porB (pyruvate oxidoreductase beta chain) (pyruvate ferredoxin oxidoreductase) (porB).
 
 0.998
porA
Pyruvate synthase subunit porA (pyruvate oxidoreductase alpha chain) (pyruvate ferredoxin oxidoreductase) (porA).
 
 0.997
porG
Pyruvate/ketoisovalerate oxidoreductases common gamma subunit (porG).
 
 
 0.995
vorB
Ketoisovalerate oxidoreductase subunit vorB (vorB).
 
 
 0.974
vorA
Ketoisovalerate oxidoreductase subunit vorA (vorA).
 
 
 0.968
korB-1
2-ketoglutarate ferredoxin oxidoreductase, subunit beta (korB).
  
 0.953
korB-2
2-ketoglutarate ferredoxin oxidoreductase, subunit beta (korB); 2 probable transmembrane helices predicted by modhmm.
  
 0.953
korA-1
2-ketoglutarate ferredoxin oxidoreductase, subunit alpha (korA).
  
 0.952
korA-2
2-ketoglutarate ferredoxin oxidoreductase, subunit alpha (korA).
  
 0.952
acsA
Acetyl-coenzyme A synthetase (acsA).
  
 
 0.917
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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