Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
vorBKetoisovalerate oxidoreductase subunit vorB (vorB). (311 aa)    
Predicted Functional Partners:
porA
Pyruvate synthase subunit porA (pyruvate oxidoreductase alpha chain) (pyruvate ferredoxin oxidoreductase) (porA).
 
 0.999
vorA
Ketoisovalerate oxidoreductase subunit vorA (vorA).
 0.999
vorD
Ketoisovalerate oxidoreductase subunit vorD (vorD).
 
 0.999
porG
Pyruvate/ketoisovalerate oxidoreductases common gamma subunit (porG).
 
 0.999
porD
Pyruvate synthase subunit porD (pyruvate oxidoreductase delta chain) (pyruvate ferredoxin oxidoreductase) (porD).
 
 
 0.992
porB
Pyruvate synthase subunit porB (pyruvate oxidoreductase beta chain) (pyruvate ferredoxin oxidoreductase) (porB).
 
    
0.863
TGAM_0268
Phosphate transporter; Belongs to PHO-4 family; 9 probable transmembrane helices predicted by modhmm.
     
 0.789
korA-1
2-ketoglutarate ferredoxin oxidoreductase, subunit alpha (korA).
  
 
 0.723
korA-2
2-ketoglutarate ferredoxin oxidoreductase, subunit alpha (korA).
  
 
 0.708
iorB-1
Indolepyruvate ferredoxin oxidoreductase beta subunit (iorB); 1 probable transmembrane helix predicted by modhmm.
  
 
 0.665
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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