Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
acdA-2Acetyl-CoA synthetase (ADP forming), alpha chain (acdA). (537 aa)    
Predicted Functional Partners:
acdB-1
Acetyl-CoA synthetase (ADP forming), beta chain (acdB).
 
 
 0.986
acdB-2
Acetyl-CoA synthetase (ADP forming), beta chain (acdB).
 
 
 0.986
TGAM_0287
Conserved hypothetical protein; 2 probable transmembrane helices predicted by modhmm.
       0.914
kaeI
Class I apurinic AP-endonuclease (AP-lyase) (KaeI); Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Kae1 likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity.
       0.649
TGAM_0272
Conserved hypothetical protein; Contains DUF835 domain; 3 probable transmembrane helices predicted by modhmm.
       0.649
coaD
Phosphopantetheine adenylyltransferase (coaD); Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the eukaryotic CoaD family.
       0.649
ppnK
Inorganic polyphosphate/ATP-NAD kinase (poly(P)/ATP NAD kinase) (ppnK); Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.618
tpiA
Triosephosphate isomerase (tpiA); Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
     
 0.497
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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