TGAM_0342 protein (Thermococcus gammatolerans)

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TGAM_0342

Membrane transport protein; 10 probable transmembrane helices predicted by modhmm. (286 aa)

Predicted Functional Partners:

priA

0.916

priB

0.915

TGAM_0415

0.554

TGAM_0345

0.553

TGAM_0617

0.527

Your Current Organism:

Thermococcus gammatolerans

NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TGAM_0342	TGAM_0345	TGAM_0342	TGAM_0345	Membrane transport protein; 10 probable transmembrane helices predicted by modhmm.	Conserved hypothetical protein.	0.553
TGAM_0342	TGAM_0415	TGAM_0342	TGAM_0415	Membrane transport protein; 10 probable transmembrane helices predicted by modhmm.	Membrane protein, putative transporter; 8 probable transmembrane helices predicted by modhmm.	0.554
TGAM_0342	TGAM_0617	TGAM_0342	TGAM_0617	Membrane transport protein; 10 probable transmembrane helices predicted by modhmm.	RecA family AAA ATPase; Contains 1 RecA_2 (PS50162) domain, 1 P_Loop (SSF52540) domain, 1 Kaic (PF06745) domain.	0.527
TGAM_0342	priA	TGAM_0342	TGAM_0343	Membrane transport protein; 10 probable transmembrane helices predicted by modhmm.	DNA primase small subunit (priA); Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synt [...]	0.916
TGAM_0342	priB	TGAM_0342	TGAM_0344	Membrane transport protein; 10 probable transmembrane helices predicted by modhmm.	DNA primase large subunit (priB); Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair.	0.915
TGAM_0345	TGAM_0342	TGAM_0345	TGAM_0342	Conserved hypothetical protein.	Membrane transport protein; 10 probable transmembrane helices predicted by modhmm.	0.553
TGAM_0345	priA	TGAM_0345	TGAM_0343	Conserved hypothetical protein.	DNA primase small subunit (priA); Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synt [...]	0.606
TGAM_0345	priB	TGAM_0345	TGAM_0344	Conserved hypothetical protein.	DNA primase large subunit (priB); Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair.	0.606
TGAM_0415	TGAM_0342	TGAM_0415	TGAM_0342	Membrane protein, putative transporter; 8 probable transmembrane helices predicted by modhmm.	Membrane transport protein; 10 probable transmembrane helices predicted by modhmm.	0.554
TGAM_0617	TGAM_0342	TGAM_0617	TGAM_0342	RecA family AAA ATPase; Contains 1 RecA_2 (PS50162) domain, 1 P_Loop (SSF52540) domain, 1 Kaic (PF06745) domain.	Membrane transport protein; 10 probable transmembrane helices predicted by modhmm.	0.527
TGAM_0617	priA	TGAM_0617	TGAM_0343	RecA family AAA ATPase; Contains 1 RecA_2 (PS50162) domain, 1 P_Loop (SSF52540) domain, 1 Kaic (PF06745) domain.	DNA primase small subunit (priA); Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synt [...]	0.649
TGAM_0617	priB	TGAM_0617	TGAM_0344	RecA family AAA ATPase; Contains 1 RecA_2 (PS50162) domain, 1 P_Loop (SSF52540) domain, 1 Kaic (PF06745) domain.	DNA primase large subunit (priB); Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair.	0.649
priA	TGAM_0342	TGAM_0343	TGAM_0342	DNA primase small subunit (priA); Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synt [...]	Membrane transport protein; 10 probable transmembrane helices predicted by modhmm.	0.916
priA	TGAM_0345	TGAM_0343	TGAM_0345	DNA primase small subunit (priA); Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synt [...]	Conserved hypothetical protein.	0.606
priA	TGAM_0617	TGAM_0343	TGAM_0617	DNA primase small subunit (priA); Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synt [...]	RecA family AAA ATPase; Contains 1 RecA_2 (PS50162) domain, 1 P_Loop (SSF52540) domain, 1 Kaic (PF06745) domain.	0.649
priA	priB	TGAM_0343	TGAM_0344	DNA primase small subunit (priA); Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synt [...]	DNA primase large subunit (priB); Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair.	0.999
priB	TGAM_0342	TGAM_0344	TGAM_0342	DNA primase large subunit (priB); Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair.	Membrane transport protein; 10 probable transmembrane helices predicted by modhmm.	0.915
priB	TGAM_0345	TGAM_0344	TGAM_0345	DNA primase large subunit (priB); Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair.	Conserved hypothetical protein.	0.606
priB	TGAM_0617	TGAM_0344	TGAM_0617	DNA primase large subunit (priB); Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair.	RecA family AAA ATPase; Contains 1 RecA_2 (PS50162) domain, 1 P_Loop (SSF52540) domain, 1 Kaic (PF06745) domain.	0.649
priB	priA	TGAM_0344	TGAM_0343	DNA primase large subunit (priB); Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair.	DNA primase small subunit (priA); Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synt [...]	0.999

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