Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_0409Glycosyltransferase, family 1. (424 aa)    
Predicted Functional Partners:
dpm1-1
Dolichol-phosphate mannosyltransferase (dpm1); 4 probable transmembrane helices predicted by modhmm.
 
  
 0.943
TGAM_0407
Conserved hypothetical protein; 1 probable transmembrane helix predicted by modhmm.
       0.793
TGAM_0405
Permease, putative, MatE related; Contains 12 transmembrane regions; 12 probable transmembrane helices predicted by modhmm.
  
  
 0.701
TGAM_0406
Oligosaccharyl transferase STT3 subunit; 10 probable transmembrane helices predicted by modhmm.
     
 0.671
TGAM_2142
Glycosyltransferase, family 1.
 
     0.650
glgP
Alpha-glucan phosphorylase (glgP).
 
 
 0.557
TGAM_1697
Hydrolase, alpha/beta superfamily; 1 probable transmembrane helix predicted by modhmm.
 
 
 
 0.511
TGAM_2139
Polysaccharide biosynthesis protein; 14 probable transmembrane helices predicted by modhmm.
 
  
 0.509
algD
GDP-mannose 6-dehydrogenase (algD).
 
  
 0.505
TGAM_0004
Polysaccharide biosynthesis protein; 10 probable transmembrane helices predicted by modhmm.
 
  
 0.502
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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