Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TGAM_0423 | TGAM_0424 | TGAM_0423 | TGAM_0424 | Conserved hypothetical protein. | Haloacid dehalogenase-like hydrolase; Belongs to subfamily IIA. | 0.800 |
TGAM_0423 | TGAM_0425 | TGAM_0423 | TGAM_0425 | Conserved hypothetical protein. | Zn-dependent hydrolase of the beta-lactamase fold family; Belongs to the UPF0173 family. | 0.609 |
TGAM_0423 | acdA-3 | TGAM_0423 | TGAM_0426 | Conserved hypothetical protein. | Acetyl-CoA synthetase (ADP forming), alpha chain (acdA). | 0.418 |
TGAM_0423 | nrdA | TGAM_0423 | TGAM_0422 | Conserved hypothetical protein. | Ribonucleoside-diphosphate reductase alpha subunit (nrdA); Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.521 |
TGAM_0424 | TGAM_0423 | TGAM_0424 | TGAM_0423 | Haloacid dehalogenase-like hydrolase; Belongs to subfamily IIA. | Conserved hypothetical protein. | 0.800 |
TGAM_0424 | TGAM_0425 | TGAM_0424 | TGAM_0425 | Haloacid dehalogenase-like hydrolase; Belongs to subfamily IIA. | Zn-dependent hydrolase of the beta-lactamase fold family; Belongs to the UPF0173 family. | 0.609 |
TGAM_0424 | acdA-3 | TGAM_0424 | TGAM_0426 | Haloacid dehalogenase-like hydrolase; Belongs to subfamily IIA. | Acetyl-CoA synthetase (ADP forming), alpha chain (acdA). | 0.418 |
TGAM_0424 | nrdA | TGAM_0424 | TGAM_0422 | Haloacid dehalogenase-like hydrolase; Belongs to subfamily IIA. | Ribonucleoside-diphosphate reductase alpha subunit (nrdA); Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.535 |
TGAM_0425 | TGAM_0423 | TGAM_0425 | TGAM_0423 | Zn-dependent hydrolase of the beta-lactamase fold family; Belongs to the UPF0173 family. | Conserved hypothetical protein. | 0.609 |
TGAM_0425 | TGAM_0424 | TGAM_0425 | TGAM_0424 | Zn-dependent hydrolase of the beta-lactamase fold family; Belongs to the UPF0173 family. | Haloacid dehalogenase-like hydrolase; Belongs to subfamily IIA. | 0.609 |
TGAM_0425 | acdA-3 | TGAM_0425 | TGAM_0426 | Zn-dependent hydrolase of the beta-lactamase fold family; Belongs to the UPF0173 family. | Acetyl-CoA synthetase (ADP forming), alpha chain (acdA). | 0.589 |
acdA-3 | TGAM_0423 | TGAM_0426 | TGAM_0423 | Acetyl-CoA synthetase (ADP forming), alpha chain (acdA). | Conserved hypothetical protein. | 0.418 |
acdA-3 | TGAM_0424 | TGAM_0426 | TGAM_0424 | Acetyl-CoA synthetase (ADP forming), alpha chain (acdA). | Haloacid dehalogenase-like hydrolase; Belongs to subfamily IIA. | 0.418 |
acdA-3 | TGAM_0425 | TGAM_0426 | TGAM_0425 | Acetyl-CoA synthetase (ADP forming), alpha chain (acdA). | Zn-dependent hydrolase of the beta-lactamase fold family; Belongs to the UPF0173 family. | 0.589 |
nrdA | TGAM_0423 | TGAM_0422 | TGAM_0423 | Ribonucleoside-diphosphate reductase alpha subunit (nrdA); Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Conserved hypothetical protein. | 0.521 |
nrdA | TGAM_0424 | TGAM_0422 | TGAM_0424 | Ribonucleoside-diphosphate reductase alpha subunit (nrdA); Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Haloacid dehalogenase-like hydrolase; Belongs to subfamily IIA. | 0.535 |