Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_0469Conserved hypothetical protein. (263 aa)    
Predicted Functional Partners:
TGAM_0470
Endoribonuclease L-PSP, YjgF-like protein.
       0.914
TGAM_0471
Metal-dependant protease, putative; Belongs to Mov34/MPN/PAD-1 family Contains Jab1/MPN domain.
       0.887
TGAM_0468
ATP-dependent protease, archaeal Lon-like protein; 2 probable transmembrane helices predicted by modhmm; Belongs to the peptidase S16 family.
       0.656
TGAM_0467
Transcription regulator protein, Lrp-Asn family.
       0.624
TGAM_0437
Transcription regulator, arsR family.
       0.592
TGAM_0472
Iron dependent transcription repressor; Contains HTH_DTXR domain.
       0.577
TGAM_0438
Nucleotide pyrophosphohydrolase, MazG-like protein.
       0.519
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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