Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_0513ATPase of the AAA superfamily, putative. (437 aa)    
Predicted Functional Partners:
TGAM_1027
ATPase of the AAA superfamily, putative.
  
     0.679
TGAM_0514
Zinc-finger protein, translation initiation factor 2 beta related protein; UCP015877 member.
       0.677
TGAM_0512
3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase), containing one PUA domain and 2 4Fe-4S binding domains.
 
     0.606
TGAM_0515
Conserved hypothetical protein; 2 probable transmembrane helices predicted by modhmm.
       0.588
cbiZ
Adenosylcobinamide amidohydrolase (AdoCbi hydrolase) (CbiZ).
       0.588
TGAM_0975
Transcription regulator, HTH/deoR family.
 
     0.504
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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