Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_0592SAM-dependent methyltransferase. (196 aa)    
Predicted Functional Partners:
TGAM_0593
Hypothetical protein, conserved in N-terminus.
       0.639
lmbE
N-acetylglucosaminylphosphatidylinositol deacetylase, putative, LmbE-like protein (LmbE).
       0.511
rps5P
SSU ribosomal protein S5P (rps5P); With S4 and S12 plays an important role in translational accuracy.
    
 0.476
rps9P
SSU ribosomal protein S9P (rps9P); Belongs to the universal ribosomal protein uS9 family.
  
 
  0.459
mbxJ
Membrane bound oxidoreductase, MbxJ subunit (MbxJ); Belongs to the complex I 20 kDa subunit family.
    
 0.438
TGAM_0970
WD40-domain containing protein; 1 probable transmembrane helix predicted by modhmm.
 
 0.433
TGAM_0169
Conserved hypothetical protein; Belongs to DUF355 family.
 
     0.416
TGAM_0595
Radical-activating enzyme, pyruvate formate-lyase related.
  
    0.410
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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