Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
malEMaltose-binding periplasmic protein precursor (maltodextrin-binding protein) (malE); 1 probable transmembrane helix predicted by modhmm. (473 aa)    
Predicted Functional Partners:
malF
Maltose transport system permease protein (malF); 5 probable transmembrane helices predicted by modhmm.
 0.999
malG
Maltose transport system permease protein (malG); 5 probable transmembrane helices predicted by modhmm.
 
 0.999
malK-1
ABC-type transport system, ATPase component, putative maltose/maltodextrin transporter (malK).
 
  
 0.985
TGAM_0599
Maltogenic alpha-amylase.
 
  
 0.957
apu-1
Amylopullulanase (Apu); 2 probable transmembrane helices predicted by modhmm.
 
   
 0.917
TGAM_1850
ABC-type sugar transporter, permease component; 6 probable transmembrane helices predicted by modhmm.
 
 
 0.909
TGAM_1561
ABC-type transport system, permease component, putative molybdate/tungstate transport; Belongs to BPD_transport family (PF00528); 6 probable transmembrane helices predicted by modhmm.
 
 
 0.908
malK-2
ABC-type transport system, ATPase component, putative maltose/maltodextrin transporter (malK).
 
  
 0.895
trmB-1
Transcription regulator, TrmB-like protein (TrmB).
 
   
 0.835
glgA
Glycogen synthase (glgA).
 
     0.813
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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