Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_0701Radical SAM protein, elongator protein 3/MiaB/NifB related. (419 aa)    
Predicted Functional Partners:
TGAM_0702
Regulator of amino acid metabolism, putative, containing ACT domain.
       0.826
TGAM_0700
Hypothetical protein; 1 probable transmembrane helix predicted by modhmm.
       0.754
mbxA
Membrane bound oxidoreductase, MbxA subunit (MbxA); 2 probable transmembrane helices predicted by modhmm.
       0.736
mbxB
Membrane bound oxidoreductase, MbxB subunit (MbxB); 3 probable transmembrane helices predicted by modhmm.
       0.736
mbxC
Membrane bound oxidoreductase, MbxC subunit (MbxC); 3 probable transmembrane helices predicted by modhmm.
       0.736
mbxF
Membrane bound oxidoreductase, MbxF subunit (MbxF); 5 probable transmembrane helices predicted by modhmm.
       0.736
mbxG
Membrane bound oxidoreductase, MbxG subunit (MbxG); 3 probable transmembrane helices predicted by modhmm.
       0.735
mbxH1
Membrane bound oxidoreductase, MbxH subunit (MbxH1); 14 probable transmembrane helices predicted by modhmm.
       0.725
mbxH2
Membrane bound oxidoreductase, MbxH' subunit (MbxH2); 16 probable transmembrane helices predicted by modhmm.
       0.725
mbxM
Membrane bound oxidoreductase, MbxM subunit (MbxM); 7 probable transmembrane helices predicted by modhmm.
       0.725
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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