Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
acdA-4Acetyl-CoA synthetase (ADP forming), alpha chain (acdA). (474 aa)    
Predicted Functional Partners:
acdB-1
Acetyl-CoA synthetase (ADP forming), beta chain (acdB).
 
 0.999
acdB-2
Acetyl-CoA synthetase (ADP forming), beta chain (acdB).
 
 0.999
TGAM_0460
Acetyl-CoA C-acetyltransferase.
  
 
  0.914
acsA
Acetyl-coenzyme A synthetase (acsA).
    
 0.912
acdA-3
Acetyl-CoA synthetase (ADP forming), alpha chain (acdA).
  
  
 
0.905
acdA-5
Acetyl-CoA synthetase (ADP forming), alpha chain (acdA).
  
  
 
0.905
acdA-1
Acetyl-CoA synthetase (ADP forming), alpha chain (acdA).
  
  
 
0.904
TGAM_0317
Coenzyme A transferase.
     
  0.900
acyP
Acylphosphatase (acyP).
    
  0.900
nfo
Deoxyribonuclease IV (BER) (Nfo); May be also related to Xylose isomerase.
       0.832
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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