Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_0744Conserved hypothetical protein. (164 aa)    
Predicted Functional Partners:
TGAM_0745
Conserved hypothetical protein; Contains band 7 domain of flotillin (reggie) like proteins; 2 probable transmembrane helices predicted by modhmm.
 
     0.972
TGAM_0743
Conserved hypothetical protein.
 
     0.965
TGAM_0746
Conserved hypothetical protein; 2 probable transmembrane helices predicted by modhmm.
 
     0.958
purE
Phosphoribosylaminoimidazole carboxylase, catalytic subunit (AIR carboxylase) (purE); Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
       0.526
purP
IMP biosynthesis enzyme (5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase) (purP).
 
     0.431
TGAM_0461
3-hydroxy-3-methylglutaryl CoA synthase; Belongs to the thiolase-like superfamily. UPF0219 family.
  
     0.410
TGAM_0748
Conserved hypothetical protein.
       0.401
TGAM_0749
Conserved hypothetical protein.
       0.401
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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