STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGAM_0752Hypothetical protein; 1 probable transmembrane helix predicted by modhmm. (229 aa)    
Predicted Functional Partners:
purP
IMP biosynthesis enzyme (5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase) (purP).
       0.581
purD
Phosphoribosylamine--glycine ligase (purD).
       0.570
TGAM_0748
Conserved hypothetical protein.
       0.433
TGAM_0749
Conserved hypothetical protein.
       0.433
TGAM_0753
Permease of the major facilitator family, putative; 12 probable transmembrane helices predicted by modhmm.
       0.423
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.