Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_0791D-aminopeptidase; Belongs to M55 MEROPS petidase family. (279 aa)    
Predicted Functional Partners:
TGAM_0790
Conserved hypothetical protein; Belongs to UPF0047 family.
       0.782
TGAM_0792
Conserved hypothetical protein.
       0.742
TGAM_0788
Protein prenyltransferase, putative; Contains Protein prenylyltransferase (SSF48439) domain.
       0.658
TGAM_0789
Conserved hypothetical protein.
       0.658
TGAM_1174
Conserved hypothetical protein.
       0.649
hps
3-hexulose-6-phosphate synthase-6-phospho 3-hexuloisomerase fused bifuntional enzyme (hps).
  
   
 0.530
dmpA
Peptidase S58, L-aminopeptidase D-Ala-esterase/amidase DmpA (DmpA).
 
   
 0.471
TGAM_0787
RNA methylase, putative; Belongs to UPF0020 family.
       0.470
TGAM_0786
Conserved hypothetical protein.
       0.424
TGAM_0152
ABC-type transport system, permease component; 6 probable transmembrane helices predicted by modhmm.
 
  
 0.410
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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