Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TGAM_0847 | tehA-2 | TGAM_0847 | TGAM_0848 | Predicted permease; Belongs to DUF81 family; 6 probable transmembrane helices predicted by modhmm. | C4-dicarboxylate transporter/malic acid transport protein (TehA/Mae1); 10 probable transmembrane helices predicted by modhmm. | 0.544 |
TGAM_1032 | tehA | TGAM_1032 | TGAM_0843 | Esterase, putative; 1 probable transmembrane helix predicted by modhmm. | C4-dicarboxylate transporter/malic acid transport protein (TehA/Mae1); 10 probable transmembrane helices predicted by modhmm. | 0.509 |
TGAM_1032 | tehA-2 | TGAM_1032 | TGAM_0848 | Esterase, putative; 1 probable transmembrane helix predicted by modhmm. | C4-dicarboxylate transporter/malic acid transport protein (TehA/Mae1); 10 probable transmembrane helices predicted by modhmm. | 0.509 |
tehA | TGAM_1032 | TGAM_0843 | TGAM_1032 | C4-dicarboxylate transporter/malic acid transport protein (TehA/Mae1); 10 probable transmembrane helices predicted by modhmm. | Esterase, putative; 1 probable transmembrane helix predicted by modhmm. | 0.509 |
tehA | tehA-2 | TGAM_0843 | TGAM_0848 | C4-dicarboxylate transporter/malic acid transport protein (TehA/Mae1); 10 probable transmembrane helices predicted by modhmm. | C4-dicarboxylate transporter/malic acid transport protein (TehA/Mae1); 10 probable transmembrane helices predicted by modhmm. | 0.903 |
tehA-2 | TGAM_0847 | TGAM_0848 | TGAM_0847 | C4-dicarboxylate transporter/malic acid transport protein (TehA/Mae1); 10 probable transmembrane helices predicted by modhmm. | Predicted permease; Belongs to DUF81 family; 6 probable transmembrane helices predicted by modhmm. | 0.544 |
tehA-2 | TGAM_1032 | TGAM_0848 | TGAM_1032 | C4-dicarboxylate transporter/malic acid transport protein (TehA/Mae1); 10 probable transmembrane helices predicted by modhmm. | Esterase, putative; 1 probable transmembrane helix predicted by modhmm. | 0.509 |
tehA-2 | tehA | TGAM_0848 | TGAM_0843 | C4-dicarboxylate transporter/malic acid transport protein (TehA/Mae1); 10 probable transmembrane helices predicted by modhmm. | C4-dicarboxylate transporter/malic acid transport protein (TehA/Mae1); 10 probable transmembrane helices predicted by modhmm. | 0.903 |