STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tehA-2C4-dicarboxylate transporter/malic acid transport protein (TehA/Mae1); 10 probable transmembrane helices predicted by modhmm. (337 aa)    
Predicted Functional Partners:
tehA
C4-dicarboxylate transporter/malic acid transport protein (TehA/Mae1); 10 probable transmembrane helices predicted by modhmm.
  
  
 
0.903
TGAM_0847
Predicted permease; Belongs to DUF81 family; 6 probable transmembrane helices predicted by modhmm.
       0.544
TGAM_1032
Esterase, putative; 1 probable transmembrane helix predicted by modhmm.
   
    0.509
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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