Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_0849Transcription regulator, arsR family, putative; Belongs to the GbsR family. (158 aa)    
Predicted Functional Partners:
TGAM_0850
Conserved hypothetical protein; 3 probable transmembrane helices predicted by modhmm.
       0.630
TGAM_1314
Voltage-gated potassium channel, putative; 2 probable transmembrane helices predicted by modhmm.
 
     0.480
TGAM_1748
Regulatory protein HTH/ArsR family, disease resistance-related, containing ATPase domain; Contains 3 TRP repeats.
 
  
 0.449
TGAM_0851
Predicted Fe-S oxidoreductase, containing Elp3 domain; Contains radical SAM/ Elongator protein 3/MiaB/NifB domain.
       0.433
TGAM_1749
Conserved hypothetical protein; Possibly a cell adhesion protein. Contains 9 APHP/CARDB and 2 PKD domains; 1 probable transmembrane helix predicted by modhmm.
  
     0.430
TGAM_2006
Regulatory protein HTH/ArsR family, disease resistance-related, containing ATPase domain; Contains 3 TRP repeats.
  
     0.404
TGAM_1192
Base excision DNA repair protein, HhH-GPD superfamily.
 
     0.403
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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