Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_0877Transcription regulator, AsnC/Lrp family. (80 aa)    
Predicted Functional Partners:
hmgA
3-hydroxy-3-methylglutaryl CoA reductase (hmgA); Belongs to the HMG-CoA reductase family.
     
 0.821
TGAM_0876
ABC-type periplasmic dipeptide transport protein; 1 probable transmembrane helix predicted by modhmm.
       0.683
ftsZ-1
Cell division GTPase, ftsZ-like protein (ftsZ); Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
      
 0.615
ftsZ-3
Cell division GTPase, ftsZ-like protein (ftsZ); Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
      
 0.615
hel308
Ski2-type helicase, putative; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks.
     
 0.596
dppF-2
ABC-type dipeptide/oligopeptide transport system, ATPase component (dppF/oppF).
 
     0.484
psmB-1
Peptidase T1A, 20S proteasome beta-subunit (psmB); Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.
  
     0.477
dppD-2
ABC-type dipeptide/oligopeptide transport system, ATPase component (dppD/oppD).
  
    0.453
oppD
Oligopeptide/dipeptide ABC transporter, permease protein (oppD/dppB); 6 probable transmembrane helices predicted by modhmm.
  
    0.453
TGAM_0167
Transcription regulator, Lrp-AsnC family.
 
 
 
 0.419
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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