Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tldD-2Peptidase U62, modulator of DNA gyrase, PmbA/TldD protein-like protein (tldD/pmbA). (458 aa)    
Predicted Functional Partners:
tldD
Peptidase U62, modulator of DNA gyrase, PmbA/TldD protein-like protein (tldD/pmbA).
 
   
0.941
TGAM_1338
Plant seed storage protein-like protein, Cupin family.
       0.643
racD-1
Aspartate racemase (racD).
       0.555
TGAM_0928
Conserved hypothetical protein; 1 probable transmembrane helix predicted by modhmm.
       0.537
eno-1
Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) (eno); Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
 
 0.420
eno-2
Enolase-related protein (eno).
   
 
 0.420
TGAM_0929
Peptidase, prolyl oligopeptidase family.
       0.401
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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