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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGAM_0929Peptidase, prolyl oligopeptidase family. (662 aa)    
Predicted Functional Partners:
TGAM_1587
Zinc-dependent metallopeptidase, putative; Contains zinc-binding region signature (PS00142).
 
 
 0.660
TGAM_0930
Conserved hypothetical protein.
       0.583
TGAM_0928
Conserved hypothetical protein; 1 probable transmembrane helix predicted by modhmm.
       0.566
preP
Prolyl oligopeptidase (preP).
  
 
 0.483
TGAM_0994
M28 family peptidase, Zn-dependent.
 
   
 0.402
tldD
Peptidase U62, modulator of DNA gyrase, PmbA/TldD protein-like protein (tldD/pmbA).
       0.401
tldD-2
Peptidase U62, modulator of DNA gyrase, PmbA/TldD protein-like protein (tldD/pmbA).
       0.401
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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