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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGAM_0933Conserved hypothetical protein; Contains 1 Histone-fold (SSF47113) domain. (153 aa)    
Predicted Functional Partners:
TGAM_0447
Conserved hypothetical protein; Contains DUF505 domain.
 
     0.741
TGAM_1292
CRISPR-associated autoregulator, DevR family; Belongs to DUF73 family. Contains 1 Nucleic acid-binding, OB-fold.
  
     0.708
mobA-2
Molybdopterin-guanine dinucleotide biosynthesis protein A, putative (mobA).
       0.612
TGAM_1300
Conserved hypothetical protein, lectin related sugar-binding protein; 1 probable transmembrane helix predicted by modhmm.
  
     0.545
TGAM_0932
Hypothetical protein; 6 probable transmembrane helices predicted by modhmm.
       0.542
TGAM_0931
Hypothetical protein; 7 probable transmembrane helices predicted by modhmm.
       0.535
TGAM_1294
CRISPR-associated helicase Cas3, core.
  
     0.506
TGAM_0537
Conserved hypothetical protein, predicted polysaccharide hydrolase or cysteinyl-tRNA synthetase; Controversial assignement (see PMID:11333988 and 14679218); 1 probable transmembrane helix predicted by modhmm.
  
     0.501
TGAM_0935
Hypothetical protein; 3 probable transmembrane helices predicted by modhmm.
       0.472
flaB1
Flagellin B1 precursor (flaB1); Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
     0.452
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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