Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TGAM_0967Hypothetical protein. (188 aa)    
Predicted Functional Partners:
TGAM_0968
Serine/threonine protein kinase; 2 probable transmembrane helices predicted by modhmm.
       0.879
TGAM_0966
ATPase of the AAA family.
       0.826
TGAM_0969
Conserved hypothetical protein; Contains quinoprotein alcohol dehydrogenase-like signature; 1 probable transmembrane helix predicted by modhmm.
       0.773
pp2C
Serine/threonine protein phosphatase 2C (PP2C); 2 probable transmembrane helices predicted by modhmm.
       0.710
TGAM_0970
WD40-domain containing protein; 1 probable transmembrane helix predicted by modhmm.
       0.605
TGAM_0972
ATPase of the AAA family.
       0.501
TGAM_0983
Hypothetical protein.
       0.456
TGAM_0984
Hypothetical protein.
       0.456
TGAM_0988
Conserved hypothetical protein.
       0.438
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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