Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_0972ATPase of the AAA family. (400 aa)    
Predicted Functional Partners:
TGAM_0974
Serine/threonine protein kinase.
   
 0.847
TGAM_0973
Voltage-gated potassium channel, putative; 2 probable transmembrane helices predicted by modhmm.
 
 
 0.814
pp2C
Serine/threonine protein phosphatase 2C (PP2C); 2 probable transmembrane helices predicted by modhmm.
  
 
 0.770
TGAM_0970
WD40-domain containing protein; 1 probable transmembrane helix predicted by modhmm.
  
 
 0.718
TGAM_0971
Hypothetical protein; 1 probable transmembrane helix predicted by modhmm.
       0.705
TGAM_0429
Acetylpolyamine amidohydrolase, histone deacetylase superfamily.
   
 0.658
TGAM_0979
Serine/threonine protein kinase; 1 probable transmembrane helix predicted by modhmm.
   
 0.656
TGAM_0977
Prokaryotic ATPase, AAA superfamily, disease resistance protein related; Contains Archaeal ATPase domain (PF01637) Contains Disease resistance protein signature (IPR000767).
  
    0.620
TGAM_0978
Prokaryotic ATPase, AAA superfamily; Contains Archaeal ATPase domain (PF01637).
 
    0.620
TGAM_0968
Serine/threonine protein kinase; 2 probable transmembrane helices predicted by modhmm.
   
 0.615
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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