Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TGAM_0983Hypothetical protein. (205 aa)    
Predicted Functional Partners:
TGAM_0984
Hypothetical protein.
      
0.914
TGAM_0988
Conserved hypothetical protein.
       0.884
TGAM_0987
Hypothetical protein.
       0.742
pp2C
Serine/threonine protein phosphatase 2C (PP2C); 2 probable transmembrane helices predicted by modhmm.
       0.740
TGAM_0985
Nucleotidyltransferase.
       0.691
TGAM_0986
Nucleotidyltransferase substrate binding subunit, putative; Belongs to DUF86 family.
       0.689
TGAM_0982
Hypothetical protein, S-layer-like related; 3 probable transmembrane helices predicted by modhmm.
       0.560
TGAM_0981
Serine/threonine protein kinase.
       0.539
TGAM_0967
Hypothetical protein.
       0.456
TGAM_0989
Serine/threonine protein kinase; 1 probable transmembrane helix predicted by modhmm.
       0.451
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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