Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TGAM_0989Serine/threonine protein kinase; 1 probable transmembrane helix predicted by modhmm. (1088 aa)    
Predicted Functional Partners:
pp2C
Serine/threonine protein phosphatase 2C (PP2C); 2 probable transmembrane helices predicted by modhmm.
 
 0.919
TGAM_0970
WD40-domain containing protein; 1 probable transmembrane helix predicted by modhmm.
 
 
0.622
TGAM_0429
Acetylpolyamine amidohydrolase, histone deacetylase superfamily.
  
 
 0.597
TGAM_1937
ATP binding protein, XPA-binding protein 1-like protein.
   
 0.583
TGAM_0990
ATPase of the AAA superfamily, putative.
 
     0.526
TGAM_0972
ATPase of the AAA family.
   
 0.524
TGAM_0982
Hypothetical protein, S-layer-like related; 3 probable transmembrane helices predicted by modhmm.
 
     0.518
TGAM_1460
recJ-like phosphoesterase, containing RNA binding S1 and OB-fold nucleic acid binding domain.
    
 0.510
TGAM_0966
ATPase of the AAA family.
   
 0.505
TGAM_1486
Conserved hypothetical protein; Contains 3 WD-40 repeat units; 2 probable transmembrane helices predicted by modhmm.
   
 
 0.497
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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