STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGAM_0996RecA family AAA ATPase; Contains 1 RecA_2 (PS50162) domain, 1 P_Loop (SSF52540) domain and 2 RecA (PR00142) domains. (235 aa)    
Predicted Functional Partners:
TGAM_0995
Conserved hypothetical protein.
   
   0.821
TGAM_0994
M28 family peptidase, Zn-dependent.
       0.800
TGAM_0616
RecA-superfamily ATPase implicated in signal transduction, putative.
 
     0.697
serB
Phosphoserine phosphatase-like hydrolase, archaeal (serB).
       0.564
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.