STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acnX-2Aconitase X, putative, Fe-S cluster subunit (AcnX); Belongs to DUF521 family. Matches PIRSF006666. see Makarova and Koonin FEMS Microbiol Lett. 2003,227:17-23. (389 aa)    
Predicted Functional Partners:
acnX
Aconitase X, putative, swiveling domain subunit (AcnX_swivel); Belongs to DUF126 family. Matches PIRSF004966. see Makarova and Koonin FEMS Microbiol Lett. 2003,227:17-23.
 
 
 0.984
TGAM_1118
Peptidase M50, putative membrane-associated zinc metallopeptidase; 6 probable transmembrane helices predicted by modhmm.
       0.698
natB
ABC-type transport protein, Na+ efflux pump membrane component (natB); 6 probable transmembrane helices predicted by modhmm.
 
     0.532
TGAM_1122
ABC-type transport system, ATPase component, putative multidrug transporter.
       0.464
TGAM_1123
Conserved hypothetical protein; 3 probable transmembrane helices predicted by modhmm.
       0.455
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
Server load: low (30%) [HD]