close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGAM_1122ABC-type transport system, ATPase component, putative multidrug transporter. (251 aa)    
Predicted Functional Partners:
natB
ABC-type transport protein, Na+ efflux pump membrane component (natB); 6 probable transmembrane helices predicted by modhmm.
 
  
 0.920
TGAM_1123
Conserved hypothetical protein; 3 probable transmembrane helices predicted by modhmm.
       0.800
TGAM_1654
Hypothetical protein; 1 probable transmembrane helix predicted by modhmm.
  
 
 0.563
TGAM_1655
Conserved hypothetical protein; 6 probable transmembrane helices predicted by modhmm.
  
 
 0.563
TGAM_1369
ABC transporter, ATP-binding protein.
 
    
0.562
TGAM_1125
Conserved hypothetical protein; 5 probable transmembrane helices predicted by modhmm.
       0.561
TGAM_1698
ABC-type transporter, ATP-binding component; 6 probable transmembrane helices predicted by modhmm.
 
  
 0.469
acnX-2
Aconitase X, putative, Fe-S cluster subunit (AcnX); Belongs to DUF521 family. Matches PIRSF006666. see Makarova and Koonin FEMS Microbiol Lett. 2003,227:17-23.
       0.464
acnX
Aconitase X, putative, swiveling domain subunit (AcnX_swivel); Belongs to DUF126 family. Matches PIRSF004966. see Makarova and Koonin FEMS Microbiol Lett. 2003,227:17-23.
       0.463
TGAM_1126
Conserved hypothetical protein; 3 probable transmembrane helices predicted by modhmm.
       0.454
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.