STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGAM_1181Sucrose-phosphate phosphatase, putative, HAD-superfamily hydrolase; Catalyzes the dephosphorylation of 2-phosphoglycolate. (247 aa)    
Predicted Functional Partners:
gyaR
Glyoxylate reductase (gyaR).
  
 
 0.919
gph
Hydrolase, HAD superfamily, Putative phosphoglycolate phosphatase (gph).
  
 
 0.908
rbcL
Ribulose 1,5-bisphosphate carboxylase large subunit (RuBisCO) (rbcL); Catalyzes the addition of molecular CO(2) and H(2)O to ribulose 1,5-bisphosphate (RuBP), generating two molecules of 3- phosphoglycerate (3-PGA). Functions in an archaeal AMP degradation pathway, together with AMP phosphorylase and R15P isomerase. Belongs to the RuBisCO large chain family. Type III subfamily.
    
  0.901
TGAM_1180
Acetyltransferase, GNAT family.
       0.800
TGAM_1072
Putative phosphoglycolate phosphatase fused to dolichol-phosphate mannose synthase (pgp/Dpm1).
  
 
 0.746
TGAM_1183
Allophanate hydrolase subunit 1.
  
    0.707
TGAM_1182
Allophanate hydrolase subunit 2.
       0.701
hps
3-hexulose-6-phosphate synthase-6-phospho 3-hexuloisomerase fused bifuntional enzyme (hps).
 
  
 0.599
lamB
Lactam utilization related protein (lamB); Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.480
TGAM_1186
Nucleotide binding protein, putative, containing PIN domain.
 
     0.477
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
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