Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cydACytochrome bd ubiquinol oxidase, subunit I (cydA); 9 probable transmembrane helices predicted by modhmm. (503 aa)    
Predicted Functional Partners:
cydB
Cytochrome bd ubiquinol oxidase, subunit II (cydB); 9 probable transmembrane helices predicted by modhmm.
 0.999
hemH
Ferrochelatase (hemH); Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
   
 0.624
pdhx
Proline dehydrogenase, delta subunit (pdhx).
  
 
 0.560
TGAM_1235
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.540
glpA-2
Anaerobic glycerol-3-phosphate dehydrogenase subunit A, putative (glpA).
    
 0.539
ubiA
4-hydroxybenzoate polyprenyltransferase, putative (UbiA); 8 probable transmembrane helices predicted by modhmm.
     
 0.520
TGAM_1228
ABC transporter, permease protein; 7 probable transmembrane helices predicted by modhmm.
       0.518
TGAM_1229
ABC transporter, periplasmic protein, putative taurine-binding protein; 1 probable transmembrane helix predicted by modhmm.
       0.518
ubiD-1
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (UbiD).
       0.516
TGAM_1234
Hypothetical protein; 2 probable transmembrane helices predicted by modhmm.
       0.514
Your Current Organism:
Thermococcus gammatolerans
NCBI taxonomy Id: 593117
Other names: T. gammatolerans EJ3, Thermococcus gammatolerans EJ3, Thermococcus gammatolerans str. EJ3, Thermococcus gammatolerans strain EJ3
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.